1. Balázs Z, Tombácz D, Szűcs A, Csabai Z, Megyeri K, Petrov AN, Snyder M, Boldogkői Z. 2017. Long-Read Sequencing of Human Cytomegalovirus Transcriptome Reveals RNA Isoforms Carrying Distinct Coding Potentials. Sci Rep 7:15989.
  2. Johnson AG, Petrov AN, Fuchs G, Majzoub K, Grosely R, Choi J, Puglisi JD. 2017. Fluorescently-tagged human eIF3 for single-molecule spectroscopy. Nucleic Acids Res:gkx1050-gkx1050.
  3. Prabhakar A, Capece MC, Petrov A, Choi J, and Puglisi JD. 2017. Post-termination Ribosome Intermediate Acts as the Gateway to Ribosome Recycling. Cell Rep. 20, 161–172.
  4. Prabhakar A, Choi J, Wang J, Petrov A, and Puglisi JD. 2017. Dynamic basis of fidelity and speed in translation: Coordinated multistep mechanisms of elongation and termination. Protein Sci. 26, 1352–1362.
  5. Johnson AG, Grosely R, Petrov A, Puglisi JD (2017) Dynamics of IRES-mediated translation. Philos Trans R Soc B Biol Sci 372(1716):20160177.
  6. Chen J, Choi J, O’Leary SE, Prabhakar A, Petrov A, Grosely R, Puglisi EV, Puglisi JD (2016) The molecular choreography of protein synthesis: translational control, regulation, and pathways. Q Rev Biophys 49:e11.
  7. Petrov A, Grosely R, Chen J, O’Leary SE, Puglisi JD (2016) Multiple Parallel Pathways of Translation Initiation on the CrPV IRES. Mol Cell 62(1):92–103.
  8. Choi J, Ieong K-W, Demirci H, Chen J, Petrov A, Prabhakar A, O’Leary SE, Dominissini D, Rechavi G, Soltis SM, Ehrenberg M, Puglisi JD (2016) N6-methyladenosine in mRNA disrupts tRNA selection and translation-elongation dynamics. Nat Struct Mol Biol 23(2):110–5.
  9. Chen J, Coakley A, O’Connor M, Petrov A, O’Leary SE, Atkins JF, Puglisi JD (2015) Coupling of mRNA Structure Rearrangement to Ribosome Movement during Bypassing of Non-coding Regions. Cell 163(5):1267–1280.
  10. Fuchs G, Petrov A, Marceau CD, Popov LM, Chen J, O’Leary SE, Wang R, Carette JE, Sarnow P, Puglisi JD (2015) Kinetic pathway of 40S ribosomal subunit recruitment to hepatitis C virus internal ribosome entry site. Proc Natl Acad Sci 112(2):319–325.
  11. Chen J, Petrov A, Johansson M, Tsai A, O’Leary SE, Puglisi JD (2014) Dynamic pathways of −1 translational frameshifting. Nature 512(7514):328–332.
  12. Chen J, Dalal RV, Petrov AN, Tsai A, O’Leary SE, Chapin K, Cheng J, Ewan M, Hsiung P-L, Lundquist P, Turner SW, Hsu DR, Puglisi JD (2014) High-throughput platform for real-time monitoring of biological processes by multicolor single-molecule fluorescence. Proc Natl Acad Sci 111(2):664–9.
  13. O’Leary SE, Petrov A, Chen J, Puglisi JD (2013) Dynamic recognition of the mRNA cap by Saccharomyces cerevisiae eIF4E. Structure 21(12):2197–2207.
  14. Chen J, Tsai A, O’Leary SE, Petrov A, Puglisi JD (2012) Unraveling the dynamics of ribosome translocation. Curr Opin Struct Biol 22(6):804–814.
  15. Tsai A, Petrov A, Marshall RA, Korlach J, Uemura S, Puglisi JD (2012) Heterogeneous pathways and timing of factor departure during translation initiation. Nature 487(7407):390–393.
  16. Petrov A, Chen J, O’Leary S, Tsai A, Puglisi JD (2012) Single-molecule analysis of translational dynamics. Cold Spring Harb Perspect Biol 4(9).
  17. Chen J, Tsai A, Petrov A, Puglisi JD (2012) Nonfluorescent quenchers to correlate single-molecule conformational and compositional dynamics. J Am Chem Soc 134(13):5734–5737.
  18. Masuda T, Petrov AN, Iizuka R, Funatsu T, Puglisi JD, Uemura S (2012) Initiation factor 2, tRNA, and 50S subunits cooperatively stabilize mRNAs on the ribosome during initiation. Proc Natl Acad Sci 109(13):4881–4885.
  19. Petrov A, Kornberg G, O’Leary S, Tsai A, Uemura S, Puglisi JD (2011) Dynamics of the translational machinery. Curr Opin Struct Biol 21(1):137–145.
  20. Petrov A, Puglisi JD (2010) Site-specific labeling of Saccharomyces cerevisiae ribosomes for single-molecule manipulations. Nucleic Acids Res 38(13).
  21. Aitken CE, Petrov A, Puglisi JD (2010) Single Ribosome Dynamics and the Mechanism of Translation. Annu Rev Biophys 39(1):491–513.
  22. Petrov AN, Meskauskas A, Roshwalb SC, Dinman JD (2008) Yeast ribosomal protein L10 helps coordinate tRNA movement through the large subunit. Nucleic Acids Res 36(19):6187–6198.
  23. Liao PY, Gupta P, Petrov AN, Dinman JD, Lee KH (2008) A new kinetic model reveals the synergistic effect of E-, P- and A-sites on +1 ribosomal frameshifting. Nucleic Acids Res 36(8):2619–2629.
  24. Swatkoski S, Gutierrez P, Wynne C, Petrov A, Dinman JD, Edwards N, Fenselau C (2008) Evaluation of microwave-accelerated residue-specific acid cleavage for proteomic applications. J Proteome Res 7(2):579–586.
  25. Swatkoski S, Gutierrez P, Ginter J, Petrov A, Dinman JD, Edwards N, Fenselau C (2007) Integration of residue-specific acid cleavage into proteomic workflows. J Proteome Res 6(11):4525–4527.
  26. Baxter-Roshek JL, Petrov AN, Dinman JD (2007) Optimization of ribosome structure and function by rRNA base modification. PLoS One 2(1). doi:10.1371/journal.pone.0000174.
  27. Meskauskas A, Petrov AN, Dinman JD (2005) Identification of Functionally Important Amino Acids of Ribosomal Protein L3 by Saturation Mutagenesis. Mol Cell Biol 25(24):10863–10874.
  28. Kiparisov S, Petrov A, Meskauskas A, Sergiev PV., Dontsova OA, Dinman JD (2005) Structural and functional analysis of 5S rRNA in Saccharomyces cerevisiae. Mol Genet Genomics 274(3):235–247.
  29. Petrov A, Meskauskas A, Dinman JD (2004) Ribosomal protein L3: influence on ribosome structure and function. RNA Biol 22(5):629.
  30. Plant EP, Jacobs KLM, Harger JW, Meskauskas A, Jacobs JL, Baxter JL, Petrov AN, Dinman JD (2003) The 9-A solution: how mRNA pseudoknots promote efficient programmed -1 ribosomal frameshifting. RNA 9(2):168–74.
  31. Dorovkov MV, Pavur KS, Petrov AN, Ryazanov AG (2002) Regulation of Elongation Factor-2 Kinase by pH. Biochemistry 41(45):13444–13450.
  32. Pavur KS, Petrov AN, Ryazanov AG (2000) Mapping the Functional Domains of Elongation Factor-2 Kinase. Biochemistry 39(40):12216–12224.

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